Last updated on 2024-12-25 00:49:38 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.2 | 42.87 | 127.50 | 170.37 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2.2 | 32.71 | 95.03 | 127.74 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2.2 | 300.25 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.2 | 298.05 | OK | |||
| r-devel-windows-x86_64 | 1.2.2 | 46.00 | 138.00 | 184.00 | OK | |
| r-patched-linux-x86_64 | 1.2.2 | 45.13 | 121.06 | 166.19 | OK | |
| r-release-linux-x86_64 | 1.2.2 | 45.78 | 121.50 | 167.28 | OK | |
| r-release-macos-arm64 | 1.2.2 | 79.00 | NOTE | |||
| r-release-macos-x86_64 | 1.2.2 | 118.00 | NOTE | |||
| r-release-windows-x86_64 | 1.2.2 | 47.00 | 136.00 | 183.00 | OK | |
| r-oldrel-macos-arm64 | 1.2.2 | 85.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 1.2.2 | 205.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.2.2 | 59.00 | 174.00 | 233.00 | OK |
Version: 1.2.2
Check: installed package size
Result: NOTE
installed size is 7.3Mb
sub-directories of 1Mb or more:
data 4.1Mb
libs 2.9Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 1.2.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(scDHA)
libtorch is not installed. Use `torch::install_torch()` to download and install libtorch
>
> on_cran <- function() !identical(Sys.getenv("NOT_CRAN"), "true")
>
> if((!torch::torch_is_installed()) &
+ (tolower(Sys.info()[["sysname"]]) != "windows") &
+ (!on_cran()))
+ {
+ torch::install_torch()
+ }
>
> Sys.setenv(IN_TEST_scDHA="true")
>
> test_check("scDHA")
[ FAIL 1 | WARN 0 | SKIP 2 | PASS 3 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• On CRAN (2): 'test-scDHA.R:3:3', 'test-scDHA.R:41:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-scDHA.R:21:3'): scDHA.vis can run ──────────────────────────────
Error in `irlba::irlba(L, nv = n, nu = 0, maxit = iters)`: function 'as_cholmod_sparse' not provided by package 'Matrix'
Backtrace:
▆
1. └─scDHA::scDHA.vis(result, ncores = 2, seed = 1) at test-scDHA.R:21:3
2. └─uwot::umap(data, n_threads = ncores)
3. └─uwot:::uwot(...)
4. └─uwot:::spectral_init(V, ndim = n_components, verbose = verbose)
5. └─uwot:::irlba_tsvd_normalized_laplacian_init(A, ndim, verbose = FALSE)
6. └─uwot:::irlba_spectral_tsvd(L, ndim + 1)
7. ├─base::suppressWarnings(...)
8. │ └─base::withCallingHandlers(...)
9. └─irlba::irlba(L, nv = n, nu = 0, maxit = iters)
[ FAIL 1 | WARN 0 | SKIP 2 | PASS 3 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64