VDJgermlines: Variable, Diversity and Joining Sequences from Various Species

Contains variable, diversity, and joining sequences and accompanying functions that enable both the extraction of and comparison between immune V-D-J genomic segments from a variety of species. Sources include IMGT from MP Lefranc (2009) <doi:10.1093/nar/gkn838> and Vgenerepertoire from publication DN Olivieri (2014) <doi:10.1007/s00251-014-0784-3>.

Version:	0.1
Depends:	R (≥ 3.1.0), ape, stringdist
Suggests:	knitr, rmarkdown
Published:	2018-12-18
DOI:	10.32614/CRAN.package.VDJgermlines
Author:	Alexander Yermanos
Maintainer:	Alexander Yermanos <ayermanos at gmail.com>
License:	GPL-2
NeedsCompilation:	no
CRAN checks:	VDJgermlines results

Documentation:

Reference manual:

VDJgermlines.pdf

Downloads:

Package source:	VDJgermlines_0.1.tar.gz
Windows binaries:	r-devel: VDJgermlines_0.1.zip, r-release: VDJgermlines_0.1.zip, r-oldrel: VDJgermlines_0.1.zip
macOS binaries:	r-release (arm64): VDJgermlines_0.1.tgz, r-oldrel (arm64): VDJgermlines_0.1.tgz, r-release (x86_64): VDJgermlines_0.1.tgz, r-oldrel (x86_64): VDJgermlines_0.1.tgz

Linking:

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