retriever: Generate Disease-Specific Response Signatures from the LINCS-L1000 Data
Generates disease-specific drug-response profiles that are independent of time, concentration, and cell-line. Based on the cell lines used as surrogates, the returned profiles represent the unique transcriptional changes induced by a compound in a given disease.
| Version: | 0.2.1 |
| Depends: | R (≥ 3.5.0) |
| Imports: | pbapply, preprocessCore |
| Suggests: | ccdata |
| Published: | 2021-11-11 |
| DOI: | 10.32614/CRAN.package.retriever |
| Author: | Daniel Osorio 
[aut, cre],
Marieke Kuijjer
[aut] |
| Maintainer: | Daniel Osorio <daniecos at uio.no> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | retriever results |
Documentation:
| Reference manual: | retriever.pdf |
Downloads:
| Package source: | retriever_0.2.1.tar.gz |
| Windows binaries: | r-devel: retriever_0.2.1.zip, r-release: retriever_0.2.1.zip, r-oldrel: retriever_0.2.1.zip |
| macOS binaries: | r-release (arm64): retriever_0.2.1.tgz, r-oldrel (arm64): retriever_0.2.1.tgz, r-release (x86_64): retriever_0.2.1.tgz, r-oldrel (x86_64): retriever_0.2.1.tgz |
| Old sources: | retriever archive |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=retriever to link to this page.