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InsdcScanner --+ | GenBankScanner
For extracting chunks of information in GenBank files
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Inherited from Inherited from |
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RECORD_START =
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HEADER_WIDTH = 12
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FEATURE_START_MARKERS =
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FEATURE_END_MARKERS =
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FEATURE_QUALIFIER_INDENT = 21
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FEATURE_QUALIFIER_SPACER =
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SEQUENCE_HEADERS =
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returns a tuple containing a list of any misc strings, and the sequence
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Handle the LOCUS/ID line, passing data to the comsumer This should be implemented by the EMBL / GenBank specific subclass Used by the parse_records() and parse() methods.
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Handle the header lines (list of strings), passing data to the comsumer This should be implemented by the EMBL / GenBank specific subclass Used by the parse_records() and parse() methods.
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Handle any lines between features and sequence (list of strings), passing data to the consumer This should be implemented by the EMBL / GenBank specific subclass Used by the parse_records() and parse() methods.
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FEATURE_START_MARKERS
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