Here is a list of all documented class members with links to the class documentation for each member:
- f -
- fasta_blank_before_id
: seqan3::sequence_file_output_options
- fasta_ignore_blanks_before_id
: seqan3::sequence_file_input_options< sequence_legal_alphabet >
- fasta_legacy_id_marker
: seqan3::sequence_file_output_options
- fasta_letters_per_line
: seqan3::sequence_file_output_options
- fastq_double_id
: seqan3::sequence_file_output_options
- field_ids
: seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::sam_file_output< selected_field_ids_, valid_formats_, ref_ids_type >
, seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::sequence_file_output< selected_field_ids_, valid_formats_ >
, seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::structure_file_output< selected_field_ids_, valid_formats_ >
- field_types
: seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- file_extensions()
: sam_file_input_format
, sam_file_output_format
, seqan3::format_bam
, seqan3::format_embl
, seqan3::format_fasta
, seqan3::format_fastq
, seqan3::format_genbank
, seqan3::format_sam
, seqan3::format_vienna
, sequence_file_input_format
, sequence_file_output_format
, structure_file_input_format
, structure_file_output_format
- file_open_error()
: seqan3::file_open_error
- file_validator_base()
: seqan3::file_validator_base
, seqan3::input_directory_validator
, seqan3::input_file_validator< file_t >
, seqan3::output_directory_validator
, seqan3::output_file_validator< file_t >
- flag()
: seqan3::sam_record< field_types, field_ids >
- flag_type
: seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- flags()
: seqan3::debug_stream_type< char_t >
- flags2()
: seqan3::debug_stream_type< char_t >
- flip()
: seqan3::dynamic_bitset< bit_capacity >
- fm_index_cursor()
: seqan3::fm_index_cursor< index_t >
- fmtflags
: seqan3::debug_stream_type< char_t >
- format_bam()
: seqan3::format_bam
- format_embl()
: seqan3::format_embl
- format_error()
: seqan3::format_error
- format_fasta()
: seqan3::format_fasta
- format_fastq()
: seqan3::format_fastq
- format_genbank()
: seqan3::format_genbank
- format_sam()
: seqan3::format_sam
- format_version
: seqan3::sam_file_header< ref_ids_type >
- format_vienna()
: seqan3::format_vienna
- free_end_gaps_sequence1_leading
: seqan3::align_cfg::method_global
- free_end_gaps_sequence1_trailing
: seqan3::align_cfg::method_global
- free_end_gaps_sequence2_leading
: seqan3::align_cfg::method_global
- free_end_gaps_sequence2_trailing
: seqan3::align_cfg::method_global
- front()
: seqan3::bitpacked_sequence< alphabet_type >
, seqan3::concatenated_sequences< underlying_container_type, data_delimiters_type >
, seqan3::dynamic_bitset< bit_capacity >
, seqan3::sam_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_ >
, seqan3::small_vector< value_type_, capacity_ >
, seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_ >
- fwd_cursor()
: seqan3::bi_fm_index< alphabet_t, text_layout_mode_, sdsl_index_type_ >
, seqan3::bi_fm_index_cursor< index_t >
- fwd_cursor_type
: seqan3::bi_fm_index< alphabet_t, text_layout_mode_, sdsl_index_type_ >