Uses of Class
org.snpeff.align.NeedlemanWunsch
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Packages that use NeedlemanWunsch Package Description org.snpeff.align -
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Uses of NeedlemanWunsch in org.snpeff.align
Subclasses of NeedlemanWunsch in org.snpeff.align Modifier and Type Class Description class
SmithWaterman
Smith-Waterman (local sequence alignment) algorithm for sequence alignment (short strings, since it's not memory optimized)class
VcfRefAltAlign
Needleman-Wunsch (global sequence alignment) algorithm for sequence alignment Only used for short strings (algorithm is not optimized)
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