vg
tools for working with variation graphs
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This is the complete list of members for vg::SnarlSeedClusterer::TreeState, including all inherited members.
all_seeds | vg::SnarlSeedClusterer::TreeState | |
chain_to_snarls | vg::SnarlSeedClusterer::TreeState | |
fragment_distance_limit | vg::SnarlSeedClusterer::TreeState | |
fragment_union_find | vg::SnarlSeedClusterer::TreeState | |
node_to_seeds | vg::SnarlSeedClusterer::TreeState | |
parent_snarl_to_nodes | vg::SnarlSeedClusterer::TreeState | |
read_cluster_dists | vg::SnarlSeedClusterer::TreeState | |
read_distance_limit | vg::SnarlSeedClusterer::TreeState | |
read_index_offsets | vg::SnarlSeedClusterer::TreeState | |
read_union_find | vg::SnarlSeedClusterer::TreeState | |
snarl_to_nodes | vg::SnarlSeedClusterer::TreeState | |
TreeState(const vector< const vector< pos_t > * > *all_seeds, int64_t read_distance_limit, int64_t fragment_distance_limit, size_t seed_count) | vg::SnarlSeedClusterer::TreeState | inline |