◆ TreeState()
vg::SnarlSeedClusterer::TreeState::TreeState |
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const vector< const vector< pos_t > * > * |
all_seeds, |
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int64_t |
read_distance_limit, |
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int64_t |
fragment_distance_limit, |
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size_t |
seed_count |
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◆ all_seeds
const vector<const vector<pos_t>*>* vg::SnarlSeedClusterer::TreeState::all_seeds |
◆ chain_to_snarls
hash_map<size_t, std::map<size_t, pair<size_t, NodeClusters> > > vg::SnarlSeedClusterer::TreeState::chain_to_snarls |
◆ fragment_distance_limit
int64_t vg::SnarlSeedClusterer::TreeState::fragment_distance_limit |
◆ fragment_union_find
structures::UnionFind vg::SnarlSeedClusterer::TreeState::fragment_union_find |
◆ node_to_seeds
vector<vector<pair<id_t, size_t> > > vg::SnarlSeedClusterer::TreeState::node_to_seeds |
◆ parent_snarl_to_nodes
◆ read_cluster_dists
vector<vector<pair<int64_t, int64_t> > > vg::SnarlSeedClusterer::TreeState::read_cluster_dists |
◆ read_distance_limit
int64_t vg::SnarlSeedClusterer::TreeState::read_distance_limit |
◆ read_index_offsets
vector<size_t> vg::SnarlSeedClusterer::TreeState::read_index_offsets |
◆ read_union_find
vector<structures::UnionFind> vg::SnarlSeedClusterer::TreeState::read_union_find |
◆ snarl_to_nodes
The documentation for this struct was generated from the following file: