vg
tools for working with variation graphs
- l -
last_correct_stage() :
vg::Funnel
latest() :
vg::Funnel
layout_order_of_handle() :
vg::DagifiedGraph
left_degree() :
vg::VG
LegacyCaller() :
vg::LegacyCaller
length() :
vg::BitString
,
vg::GaplessExtension
,
vg::MaximalExactMatch
,
vg::VG
less_than() :
vg::StreamSorter< Message >
likelihoods() :
vg::VG
likely_mate_positions() :
vg::Mapper
likely_mismapping() :
vg::MultipathMapper
linear_haplo_structure() :
haplo::linear_haplo_structure
LinearScoreProvider() :
haplo::LinearScoreProvider
load() :
vg::MinimumDistanceIndex::ChainIndex
,
vg::MinimumDistanceIndex
,
vg::MinimumDistanceIndex::SnarlIndex
,
vg::Packer
,
vg::Packers
,
vg::Paths
,
vg::StreamIndexBase
,
vg::Translator
load_alignments() :
vg::MSAConverter
load_all() :
vg::io::VPKG
load_bed() :
vg::FeatureSet
load_from_file() :
vg::Packer
load_graph() :
vg::Index
load_into_one() :
vg::io::VPKG
load_one() :
vg::io::VPKG
load_pack_as_supports() :
vg::SupportAugmentedGraph
load_paths() :
vg::Index
load_scoring_matrix() :
vg::AlignerClient
,
vg::GSSWAligner
load_supports() :
vg::SupportAugmentedGraph
load_translations() :
vg::AugmentedGraph
lock() :
vg::GraphSynchronizer::Lock
Lock() :
vg::GraphSynchronizer::Lock
locus_to_variant() :
vg::Genotyper
log_continue_factor() :
haplo::haploMath::RRMemo
log_population_size() :
haplo::haploMath::RRMemo
log_recombination_penalty() :
haplo::haploMath::RRMemo
log_target() :
vg::MCMCGenotyper
logRRDiff() :
haplo::haploMath::RRMemo
logS() :
haplo::haploMath::RRMemo
logT() :
haplo::haploMath::RRMemo
longest_detectable_gap() :
vg::GSSWAligner
loopDistance() :
vg::MinimumDistanceIndex::ChainIndex
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